ME-modeling workshop
A virtual hands-on workshop on advanced multi-scale cell simulation.
March-April, 2025
(Exact date TBD)
Location: Virtual
Time investment: 4 hours/day x 2 days
Stay in the loop.
Workshop Outcomes
Build technical skills for implementation
Evaluate ME-model feasibility for projects
Enhance strain design capabilities through hands-on practice
Build direct experience
Develop tacit knowhow for ME-modeling with guidance from instructor with a decade of experience
Suitable for industry professionals, advanced PhD students, and postdoctoral scholars in microbial fermentation
Technical focus
Practical Implementation
Learn how to implement ME models regularly for rate, titer, yield prediction
Apply diagnostics and design using fermentation and omic data
Identify genes for up/down-regulation to improve product flux
Data Integration
Use omics data effectively in ME-modeling
Integrate RNA-Seq and proteomic data effectively
Analyze stress responses for optimization
Accessibility & Setup
How to not spend time setting things up
Navigate setup efficiently and avoid technical hurdles
Find and use organism information effectively
Integrate components for metabolic engineering applications
How to ME-model non-model organisms
Workflow to assess feasibility of ME-modeling for a new (non-model) organism
Build ME-models for your specific organism
Demonstrate ME-modeling contributions to precision fermentation
Fermentation AI
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